| Data Details | |
| Disease Name | liver cirrhosis |
| Tissue | liver |
| Database | GEO |
| Data ID | GSE98618 |
| Data Type | sequence |
| Platform | GPL18900 |
| Species | homo sapiens |
| Sample Number | 56 |
| PubMed ID | 28843658 |
| Title | Trunk events present minimal intra- and inter-tumoral heterogeneity in hepatocellular carcinoma [multinodular CNV] |
| Data Description | "Paraffin-embedded and fresh-frozen samples representing early steps of hepatocarcinogenesis were collected and gDNA was extracted. This cohort comprised: 29 dysplastic nodules (DN) -including low-grade and high-grade dysplasia (LGDN and HGDN)-; and 17 small tumors (sHCCs) -including 6 very-early and 11 early HCCs (veHCC and eHCC). When available matched cirrhotic tissues was also collected and extracted. Comparative Genomic Hybridization analysis was done using HumanOmniExpress-24 v1.1 BeadChip (Illumina) according to manufacturer's protocols. Previous treatment with the Infinium FFPE restoration kit (Illumina) was performed for FFPE samples. Log R ratio (LRR, reflecting total copy number) and B-allele frequency (BAF) obtained from GenomeStudio were used for CNV detection." |
| Keyword | cirrhosis gDNA |
| Download |
FDRdb: Fibrosis Disease-associated RNAnome database
Contact lianghaihai@ems.hrbmu.edu.cn for inquiries and feedback
© All right reserved 2022